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07 Oct 2019
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Which pitfall traps and sampling efforts should be used to evaluate the effects of cropping systems on the taxonomic and functional composition of arthropod communities?

On the importance of experimental design: pitfall traps and arthropod communities

Recommended by ORCID_LOGO based on reviews by Cécile ALBERT and Matthias Foellmer

Despite the increasing refinement of statistical methods, a robust experimental design is still one of the most important cornerstones to answer ecological and evolutionary questions. However, there is a strong trade-off between a perfect design and its feasibility. A common mantra is that more data is always better, but how much is enough is complex to answer, specially when we want to capture the spatial and temporal variability of a given process. Gardarin and Valantin-Morison [1] make an effort to answer these questions for a practical case: How many pitfalls traps, of which type, and over which extent, do we need to detect shifts in arthropod community composition in agricultural landscapes. There is extense literature on how to approach these challenges using preliminary data in combination with simulation methods [e.g. 2], but practical cases are always welcomed to illustrate the complexity of the decisions to be made. A key challenge in this situation is the nature of simplified and patchy agricultural arthropod communities. In this context, small effect sizes are expected, but those small effects are relevant from an ecological point of view because small increases at low biodiversity may produce large gains in ecosystem functioning [3].
The paper shows that some variables are not important, such as the type of fluid used to fill the pitfall traps. This is good news for potential comparisons among studies using slightly different protocols. However, the bad news are that the sampling effort needed for detecting community changes is larger than the average effort currently implemented. A potential solution is to focus on Community Weighed Mean metrics (CWM; i.e. a functional descriptor of the community body size distribution) rather than on classic metrics such as species richness, as detecting changes on CWM requires a lower sampling effort and it has a clear ecological interpretation linked to ecosystem functioning.
Beyond the scope of the data presented, which is limited to a single region over two years, and hence it is hard to extrapolate to other regions and years, the big message of the paper is the need to incorporate statistical power simulations as a central piece of the ecologist's toolbox. This is challenging, especially when you face questions such as: Should I replicate over space, or over time? The recommended paper is accompanied by the statistical code used, which should facilitate this task to other researchers. Furthermore, we should be aware that some important questions in ecology are highly variable in space and time, and hence, larger sampling effort across space and time is needed to detect patterns. Larger and longer monitoring schemes require a large effort (and funding), but if we want to make relevant ecology, nobody said it would be easy.

References

[1] Gardarin, A. and Valantin-Morison, M. (2019). Which pitfall traps and sampling efforts should be used to evaluate the effects of cropping systems on the taxonomic and functional composition of arthropod communities? Zenodo, 3468920, ver. 3 peer-reviewed and recommended by PCI Ecology. doi: 10.5281/zenodo.3468920
[2] Johnson, P. C., Barry, S. J., Ferguson, H. M., and Müller, P. (2015). Power analysis for generalized linear mixed models in ecology and evolution. Methods in ecology and evolution, 6(2), 133-142. doi: 10.1111/2041-210X.12306
[3] Cardinale, B. J. et al. (2012). Biodiversity loss and its impact on humanity. Nature, 486(7401), 59-67. doi: 10.1038/nature11148

Which pitfall traps and sampling efforts should be used to evaluate the effects of cropping systems on the taxonomic and functional composition of arthropod communities?Antoine Gardarin and Muriel Valantin-Morison<p>1. Ground dwelling arthropods are affected by agricultural practices, and analyses of their responses to different crop management are required. The sampling efficiency of pitfall traps has been widely studied in natural ecosystems. In arable a...Agroecology, Biodiversity, Biological control, Community ecologyIgnasi Bartomeus2019-01-08 09:40:14 View
21 Oct 2020
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Why scaling up uncertain predictions to higher levels of organisation will underestimate change

Uncertain predictions of species responses to perturbations lead to underestimate changes at ecosystem level in diverse systems

Recommended by based on reviews by Carlos Melian and 1 anonymous reviewer

Different sources of uncertainty are known to affect our ability to predict ecological dynamics (Petchey et al. 2015). However, the consequences of uncertainty on prediction biases have been less investigated, especially when predictions are scaled up to higher levels of organisation as is commonly done in ecology for instance. The study of Orr et al. (2020) addresses this issue. It shows that, in complex systems, the uncertainty of unbiased predictions at a lower level of organisation (e.g. species level) leads to a bias towards underestimation of change at higher level of organisation (e.g. ecosystem level). This bias is strengthened by larger uncertainty and by higher dimensionality of the system.
This general result has large implications for many fields of science, from economics to energy supply or demography. In ecology, as discussed in this study, these results imply that the uncertainty of predictions of species’ change increases the probability of underestimation of changes of diversity and stability at community and ecosystem levels, especially when species richness is high. The uncertainty of predictions of species’ change also increases the probability of underestimation of change when multiple ecosystem functions are considered at once, or when the combined effect of multiple stressors is considered.
The consequences of species diversity on ecosystem functions and stability have received considerable attention during the last decades (e.g. Cardinale et al. 2012, Kéfi et al. 2019). However, since the bias towards underestimation of change increases with species diversity, future studies will need to investigate how the general statistical effect outlined by Orr et al. might affect our understanding of the well-known relationships between species diversity and ecosystem functioning and stability in response to perturbations.

References

Cardinale BJ, Duffy JE, Gonzalez A, Hooper DU, Perrings C, Venail P, Narwani A, Mace GM, Tilman D, Wardle DA, Kinzig AP, Daily GC, Loreau M, Grace JB, Larigauderie A, Srivastava DS, Naeem S (2012) Biodiversity loss and its impact on humanity. Nature, 486, 59–67. https://doi.org/10.1038/nature11148
Kéfi S, Domínguez‐García V, Donohue I, Fontaine C, Thébault E, Dakos V (2019) Advancing our understanding of ecological stability. Ecology Letters, 22, 1349–1356. https://doi.org/10.1111/ele.13340
Orr JA, Piggott JJ, Jackson A, Arnoldi J-F (2020) Why scaling up uncertain predictions to higher levels of organisation will underestimate change. bioRxiv, 2020.05.26.117200. https://doi.org/10.1101/2020.05.26.117200
Petchey OL, Pontarp M, Massie TM, Kéfi S, Ozgul A, Weilenmann M, Palamara GM, Altermatt F, Matthews B, Levine JM, Childs DZ, McGill BJ, Schaepman ME, Schmid B, Spaak P, Beckerman AP, Pennekamp F, Pearse IS (2015) The ecological forecast horizon, and examples of its uses and determinants. Ecology Letters, 18, 597–611. https://doi.org/10.1111/ele.12443

Why scaling up uncertain predictions to higher levels of organisation will underestimate changeJames Orr, Jeremy Piggott, Andrew Jackson, Jean-François Arnoldi<p>Uncertainty is an irreducible part of predictive science, causing us to over- or underestimate the magnitude of change that a system of interest will face. In a reductionist approach, we may use predictions at the level of individual system com...Community ecology, Ecosystem functioning, Theoretical ecologyElisa ThebaultAnonymous2020-06-02 15:41:12 View